Stem-loop cli-mir-9641

Accession

MI0030121

Description

Columba livia cli-mir-9641 precursor miRNA

Sequence

gucggcugcucgggaaCCGCUGGCACGUUGGAGCCCUCGCCuuugugccucucggCGAGCGUGAUGUGCCACGGCUCucgucggccuguc
...(((((..(((((.(((.(((((((((...((.((((((............)))))).)))))))))))))).))))).)))))....

Structure

-guc     cu     a   C         GGA  C      uuugu 
    ggcug  cggga CCG UGGCACGUU   GC CUCGCC     g
    |||||  ||||| ||| |||||||||   || ||||||      
    ccggc  gcuCU GGC ACCGUGUAG   UG GAGCgg     c
cugu     -u     C   -         ---  C      cucuc 

Annotation confidence Not enough data

Genome context

KB375748.1: 504479-504568 [+]

Mature cli-miR-9641-5p

• Accession: MIMAT0038775
• Description: Columba livia cli-miR-9641-5p mature miRNA
• Sequence: 17 - CCGCUGGCACGUUGGAGCCCUCGCC - 41
• Evidence: experimental ; Illumina [1]

Mature cli-miR-9641-3p

• Accession: MIMAT0038776
• Description: Columba livia cli-miR-9641-3p mature miRNA
• Sequence: 56 - CGAGCGUGAUGUGCCACGGCUC - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196