miRBase entry: cli-mir-9627

Stem-loop cli-mir-9627


Accession
MI0030106
Description
Columba livia cli-mir-9627 precursor miRNA


Sequence

gaagguuuuguagcuCAGGAGCAGUGCCAAGGCUGGGcuggcucugcgccuCAGCGUGGGCACUGCUCCAGACcuaauaaacccug
...(((((..(((.((.(((((((((((.(.(((((((.(......)))).)))).).))))))))))).)).)))..)))))...

Structure
gaa     ug   c  A           A G    -   u gc 
   gguuu  uag uC GGAGCAGUGCC A GCUG GGc g  u
   |||||  ||| || ||||||||||| | |||| ||| |   
   ccaaa  auc AG CCUCGUCACGG U CGAC ccg c  c
guc     ua   C  A           G G    u   - gu 


Annotation confidence Not enough data
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Genome context
KB375513.1: 123086-123171 [+]

Database links

Mature cli-miR-9627-5p

Accession MIMAT0038745
Description Columba livia cli-miR-9627-5p mature miRNA
Sequence 16 - CAGGAGCAGUGCCAAGGCUGGG - 37
Evidence experimental
Illumina [1]

Mature cli-miR-9627-3p

Accession MIMAT0038746
Description Columba livia cli-miR-9627-3p mature miRNA
Sequence 52 - CAGCGUGGGCACUGCUCCAGAC - 73
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196