miRBase entry: cli-mir-9619

Stem-loop cli-mir-9619


Accession
MI0030096
Description
Columba livia cli-mir-9619 precursor miRNA


Sequence

ugugagccugauccaaUAUUCCUUAAGUAGGCAAAGUUgauucuuucacagUUUUGCCUGCUCAAGGGGUAGAggaauag
.......(((.(((..((((((((.(((((((((((.(((.....)))...))))))))))).))))))))..))).)))

Structure
ugugagc   a   aa        A           --U   u 
       cug ucc  UAUUCCUU AGUAGGCAAAG   Uga u
       ||| |||  |||||||| |||||||||||   ||| c
       gau agg  AUGGGGAA UCGUCCGUUUU   acu u
-------   a   AG        C           gac   u 


Annotation confidence Not enough data
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Genome context
KB375307.1: 6214554-6214633 [-]

Database links

Mature cli-miR-9619-5p

Accession MIMAT0038727
Description Columba livia cli-miR-9619-5p mature miRNA
Sequence 17 - UAUUCCUUAAGUAGGCAAAGUU - 38
Evidence experimental
Illumina [1]

Mature cli-miR-9619-3p

Accession MIMAT0038728
Description Columba livia cli-miR-9619-3p mature miRNA
Sequence 52 - UUUUGCCUGCUCAAGGGGUAGA - 73
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196