Stem-loop cli-mir-9619

Accession

MI0030096

Description

Columba livia cli-mir-9619 precursor miRNA

Sequence

ugugagccugauccaaUAUUCCUUAAGUAGGCAAAGUUgauucuuucacagUUUUGCCUGCUCAAGGGGUAGAggaauag
.......(((.(((..((((((((.(((((((((((.(((.....)))...))))))))))).))))))))..))).)))

Structure

ugugagc   a   aa        A           --U   u 
       cug ucc  UAUUCCUU AGUAGGCAAAG   Uga u
       ||| |||  |||||||| |||||||||||   ||| c
       gau agg  AUGGGGAA UCGUCCGUUUU   acu u
-------   a   AG        C           gac   u 

Annotation confidence Not enough data

Genome context

KB375307.1: 6214554-6214633 [-]

Mature cli-miR-9619-5p

• Accession: MIMAT0038727
• Description: Columba livia cli-miR-9619-5p mature miRNA
• Sequence: 17 - UAUUCCUUAAGUAGGCAAAGUU - 38
• Evidence: experimental ; Illumina [1]

Mature cli-miR-9619-3p

• Accession: MIMAT0038728
• Description: Columba livia cli-miR-9619-3p mature miRNA
• Sequence: 52 - UUUUGCCUGCUCAAGGGGUAGA - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196