miRBase entry: cli-mir-1803-1

Stem-loop cli-mir-1803-1


Accession
MI0030082
Description
Columba livia cli-mir-1803-1 precursor miRNA


Sequence

gaagagcuuggggcaugaaccAGAGCCCAUUGUAGUCAAUGGgagucuuuuuccAUUGACUUCAGUGGGGUUUGAaucaggccuuuacuuc
((((.....(((((.(((..((((.(((((((.((((((((((((....)))))))))))).))))))).))))..))).)))))..))))

Structure
    agcuu     a   ac    G       U            u 
gaag     ggggc uga  cAGA CCCAUUG AGUCAAUGGgag c
||||     ||||| |||  |||| ||||||| ||||||||||||  
cuuc     uuccg acu  GUUU GGGUGAC UCAGUUAccuuu u
    ---au     g   aA    G       U            u 


Annotation confidence Not enough data
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Genome context
KB375464.1: 2790606-2790696 [+]

Database links

Mature cli-miR-1803-5p

Accession MIMAT0038703
Description Columba livia cli-miR-1803-5p mature miRNA
Sequence 22 - AGAGCCCAUUGUAGUCAAUGG - 42
Evidence experimental
Illumina [1]

Mature cli-miR-1803-3p

Accession MIMAT0038704
Description Columba livia cli-miR-1803-3p mature miRNA
Sequence 55 - AUUGACUUCAGUGGGGUUUGA - 75
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196