miRBase entry: cli-mir-1388

Stem-loop cli-mir-1388


Accession
MI0030064
Description
Columba livia cli-mir-1388 precursor miRNA


Sequence

agcgagaggcaccucgAGGACUGUCUAACCUGAGAAUGgugaaauguaagggucaAUCUCAGGUUCGUCAGCCCAUGagacgccuucuccag
...(((((((..((((.((.(((.(.(((((((((.(((.............))).))))))))).).))).)).))))..))).))))...

Structure
agc    -   ac    A  A   U U         A   ugaaa 
   gaga ggc  cucg GG CUG C AACCUGAGA UGg     u
   |||| |||  |||| || ||| | ||||||||| |||     g
   cucu ccg  gaGU CC GAC G UUGGACUCU acu     u
gac    u   ca    A  C   U C         A   gggaa 


Annotation confidence Not enough data
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Genome context
KB375315.1: 1588254-1588345 [-]

Database links

Mature cli-miR-1388-5p

Accession MIMAT0038674
Description Columba livia cli-miR-1388-5p mature miRNA
Sequence 17 - AGGACUGUCUAACCUGAGAAUG - 38
Evidence experimental
Illumina [1]

Mature cli-miR-1388-3p

Accession MIMAT0038675
Description Columba livia cli-miR-1388-3p mature miRNA
Sequence 56 - AUCUCAGGUUCGUCAGCCCAUG - 77
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196