miRBase entry: cli-mir-1329

Stem-loop cli-mir-1329


Accession
MI0030063
Description
Columba livia cli-mir-1329 precursor miRNA


Sequence

gucugguuguagagaUACAGUGAUCAGGUUACGAUGGAuuucucaaguaacaacCUCGUAGCUUGAUCACGAUAUCccuaugacuugagaa
.((.((((((((.((((..(((((((((((((((.((................)))))))))))))))))..)))).)))))))).))...

Structure
--g  u        a    CA               U  Auuucuc 
   uc gguuguag gaUA  GUGAUCAGGUUACGA GG       a
   || |||||||| ||||  ||||||||||||||| ||        
   ag ucaguauc CUAU  CACUAGUUCGAUGCU Cc       a
aag  u        c    AG               -  aacaaug 


Annotation confidence Not enough data
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Genome context
KB375528.1: 20717993-20718083 [+]

Database links

Mature cli-miR-1329-5p

Accession MIMAT0038672
Description Columba livia cli-miR-1329-5p mature miRNA
Sequence 16 - UACAGUGAUCAGGUUACGAUGGA - 38
Evidence experimental
Illumina [1]

Mature cli-miR-1329-3p

Accession MIMAT0038673
Description Columba livia cli-miR-1329-3p mature miRNA
Sequence 55 - CUCGUAGCUUGAUCACGAUAUC - 76
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196