miRBase entry: cli-mir-551a

Stem-loop cli-mir-551a


Accession
MI0030057
Description
Columba livia cli-mir-551a precursor miRNA


Sequence

cugugcgugaccuugGAAAUCAAGUGUAGGUGGAGCCUguggcagcgaucaagGCGACCCACACUUGGUUUCAAggguccgcaggg
((.((((.((((((.((((((((((((.((.(..((((.(((......)))))))..))))))))))))))).)))))))))).))

Structure
  g    u      g            A  U GA    g   ca 
cu ugcg gaccuu GAAAUCAAGUGU GG G  GCCU ugg  g
|| |||| |||||| |||||||||||| || |  |||| |||   
gg acgc cugggA CUUUGGUUCACA CC C  CGga acu  c
  g    -      A            -  - AG    -   ag 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
KB376210.1: 3837047-3837132 [-]

Database links

Mature cli-miR-551a-5p

Accession MIMAT0038662
Description Columba livia cli-miR-551a-5p mature miRNA
Sequence 16 - GAAAUCAAGUGUAGGUGGAGCCU - 38
Evidence experimental
Illumina [1]

Mature cli-miR-551a-3p

Accession MIMAT0038663
Description Columba livia cli-miR-551a-3p mature miRNA
Sequence 54 - GCGACCCACACUUGGUUUCAA - 74
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196