miRBase entry: cli-mir-489

Stem-loop cli-mir-489


Accession
MI0030054
Description
Columba livia cli-mir-489 precursor miRNA


Sequence

ggcuuggUGGUCGUAUGUAUGACGUCAUUuacuuggacuuuuaggagUGACAUCAUAUGUACGGCUGCUaaacugcug
((((((((((((((((((((((.((((((..(((((....))))))))))).)))))))))))))))))))...))).

Structure
-   ---                   C      ua     a 
 ggc   uuggUGGUCGUAUGUAUGA GUCAUU  cuugg c
 |||   ||||||||||||||||||| ||||||  |||||  
 ucg   aaUCGUCGGCAUGUAUACU CAGUga  ggauu u
g   uca                   A      --     u 


Annotation confidence Not enough data
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Genome context
KB375449.1: 1811709-1811786 [+]

Database links

Mature cli-miR-489-5p

Accession MIMAT0038656
Description Columba livia cli-miR-489-5p mature miRNA
Sequence 8 - UGGUCGUAUGUAUGACGUCAUU - 29
Evidence experimental
Illumina [1]

Mature cli-miR-489-3p

Accession MIMAT0038657
Description Columba livia cli-miR-489-3p mature miRNA
Sequence 48 - UGACAUCAUAUGUACGGCUGCU - 69
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196