Stem-loop cli-mir-489

Accession

MI0030054

Description

Columba livia cli-mir-489 precursor miRNA

Sequence

ggcuuggUGGUCGUAUGUAUGACGUCAUUuacuuggacuuuuaggagUGACAUCAUAUGUACGGCUGCUaaacugcug
((((((((((((((((((((((.((((((..(((((....))))))))))).)))))))))))))))))))...))).

Structure

-   ---                   C      ua     a 
 ggc   uuggUGGUCGUAUGUAUGA GUCAUU  cuugg c
 |||   ||||||||||||||||||| ||||||  |||||  
 ucg   aaUCGUCGGCAUGUAUACU CAGUga  ggauu u
g   uca                   A      --     u 

Annotation confidence Low

Genome context

KB375449.1: 1811709-1811786 [+]

Mature cli-miR-489-5p

• Accession: MIMAT0038656
• Description: Columba livia cli-miR-489-5p mature miRNA
• Sequence: 8 - UGGUCGUAUGUAUGACGUCAUU - 29
• Evidence: experimental ; Illumina [1]

Mature cli-miR-489-3p

• Accession: MIMAT0038657
• Description: Columba livia cli-miR-489-3p mature miRNA
• Sequence: 48 - UGACAUCAUAUGUACGGCUGCU - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196