miRBase entry: cli-mir-449a

Stem-loop cli-mir-449a


Accession
MI0030042
Description
Columba livia cli-mir-449a precursor miRNA


Sequence

aucugugugggaugggaUGGCAGUGUGUGUUAGCUGGUugaaauucugacaucagcuaacaugcaguugcuauccuuuuccacauaccu
...(((((((((.(((((((((((((((((((((((((............))))))))))))))).)))))))))).)))))))))...

Structure
auc         u          -               ugaaa 
   uguguggga gggaUGGCAG UGUGUGUUAGCUGGU     u
   ||||||||| |||||||||| |||||||||||||||      
   auacaccuu uccuaucguu acguacaaucgacua     u
ucc         u          g               caguc 


Annotation confidence Not enough data
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Genome context
KB375359.1: 2803138-2803226 [-]
Clustered miRNAs
3 other miRNAs are < 10 kb from cli-mir-449a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cli-miR-449a-5p

Accession MIMAT0038636
Description Columba livia cli-miR-449a-5p mature miRNA
Sequence 18 - UGGCAGUGUGUGUUAGCUGGU - 38
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196