miRBase entry: cli-mir-223

Stem-loop cli-mir-223


Accession
MI0030025
Description
Columba livia cli-mir-223 precursor miRNA


Sequence

agcgcggugccgcgcugCGUGUAUUUGACAAGCUGAGUCCgacacucagugcgagagUGUCAGUUUGUCAAAUACCCCAagcgaggcacugcuga
...((((((((.((((....((((((((((((((......(((((((.......)))))))))))))))))))))....)))).))))))))...

Structure
agc        g    gCGU              GAGUCC       ag 
   gcggugcc cgcu    GUAUUUGACAAGCU      gacacuc  u
   |||||||| ||||    ||||||||||||||      |||||||  g
   cgucacgg gcga    CAUAAACUGUUUGA      CUGUgag  c
agu        a    ACCC              ------       ag 


Annotation confidence Not enough data
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Genome context
KB375664.1: 204593-204687 [+]

Database links

Mature cli-miR-223-5p

Accession MIMAT0038609
Description Columba livia cli-miR-223-5p mature miRNA
Sequence 18 - CGUGUAUUUGACAAGCUGAGUCC - 40
Evidence experimental
Illumina [1]

Mature cli-miR-223-3p

Accession MIMAT0038610
Description Columba livia cli-miR-223-3p mature miRNA
Sequence 58 - UGUCAGUUUGUCAAAUACCCCA - 79
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196