miRBase entry: cli-mir-222b

Stem-loop cli-mir-222b


Accession
MI0030024
Description
Columba livia cli-mir-222b precursor miRNA


Sequence

caauggugcucuuggcugcucaguagucgguguaggaucugucugacagucucgcuaacAGCUACAUCUGAUUACUGGGUCACcaaagggugaccacacu
...((((((((((((..((((((((((((((((((...((((..(.(......))..))))))))).)))))))))))))..)).)))))).))))....

Structure
-caa    -      -  cu             -     gau    cu a ag 
    uggu gcucuu gg  gcucaguagucgg uguag   cugu  g c  u
    |||| |||||| ||  ||||||||||||| |||||   ||||  | |   
    acca ugggaa cC  UGGGUCAUUAGUC ACAUC   GAca  c g  c
ucac    g      a  AC             U     ---    au - cu 


Annotation confidence Not enough data
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Genome context
KB375349.1: 1257557-1257656 [+]

Database links

Mature cli-miR-222b-3p

Accession MIMAT0038608
Description Columba livia cli-miR-222b-3p mature miRNA
Sequence 60 - AGCUACAUCUGAUUACUGGGUCAC - 83
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196