miRBase entry: cli-mir-205a

Stem-loop cli-mir-205a


Accession
MI0030011
Description
Columba livia cli-mir-205a precursor miRNA


Sequence

caauccauggguucuguugUCCUUCAUUCCACCGGAGUCUGucucauaccuaaaccaGAUUUCAGUGGAGUGAAGUACGagagacauggagau
...((((((...(((.((((.(((((((((((.((((((((..............)))))))).))))))))))).)))).)))))))))...

Structure
caa      ggu   g    C           C        ucucau 
   uccaug   ucu uugU CUUCAUUCCAC GGAGUCUG      a
   ||||||   ||| |||| ||||||||||| ||||||||       
   agguac   aga aGCA GAAGUGAGGUG CUUUAGac      c
uag      ---   g    U           A        caaauc 


Annotation confidence Not enough data
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Genome context
KB375734.1: 2679531-2679623 [+]

Database links

Mature cli-miR-205a-5p

Accession MIMAT0038584
Description Columba livia cli-miR-205a-5p mature miRNA
Sequence 20 - UCCUUCAUUCCACCGGAGUCUG - 41
Evidence experimental
Illumina [1]

Mature cli-miR-205a-3p

Accession MIMAT0038585
Description Columba livia cli-miR-205a-3p mature miRNA
Sequence 58 - GAUUUCAGUGGAGUGAAGUACG - 79
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196