miRBase entry: cli-mir-204-3

Stem-loop cli-mir-204-3


Accession
MI0030010
Description
Columba livia cli-mir-204-3 precursor miRNA


Sequence

cccccugugagcUUCCCUUUGUCAUCCUAUGCCUgagccauggccgagGCUGGGACGGUGAAGGGAGGCccacgggcug
...((((((.(((((((((((((.(((((.((((..((....))..))))))))).))))))))))))).))))))...

Structure
ccc      a             A     U    ga  c 
   ccugug gcUUCCCUUUGUC UCCUA GCCU  gc a
   |||||| ||||||||||||| ||||| ||||  ||  
   gggcac CGGAGGGAAGUGG AGGGU CGga  cg u
guc      c             C     -    gc  g 


Annotation confidence Not enough data
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Genome context
KB375474.1: 1274454-1274532 [+]

Database links

Mature cli-miR-204-5p

Accession MIMAT0038580
Description Columba livia cli-miR-204-5p mature miRNA
Sequence 13 - UUCCCUUUGUCAUCCUAUGCCU - 34
Evidence experimental
Illumina [1]

Mature cli-miR-204-3-3p

Accession MIMAT0038583
Description Columba livia cli-miR-204-3-3p mature miRNA
Sequence 49 - GCUGGGACGGUGAAGGGAGGC - 69
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196