miRBase entry: cli-mir-142

Stem-loop cli-mir-142


Accession
MI0029977
Description
Columba livia cli-mir-142 precursor miRNA


Sequence

gagacagugcagucaccCAUAAAGUAGAAAGCACUACUaaacagcacugcagggugUAGUGUUUCCUACUUUAUGGAugaguguacuguggg
...((((((((.(((.(((((((((((.(((((((((....(.((...)).)...))))))))).))))))))))).))).))))))))...

Structure
gag        g   c           A         Uaaa a  a 
   acagugca uca cCAUAAAGUAG AAGCACUAC    c gc  
   |||||||| ||| ||||||||||| |||||||||    | || c
   ugucaugu agu GGUAUUUCAUC UUUGUGAUg    g cg  
ggg        g   A           C         -ugg a  u 


Annotation confidence Not enough data
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Genome context
KB375567.1: 47087-47178 [+]

Database links

Mature cli-miR-142-5p

Accession MIMAT0038529
Description Columba livia cli-miR-142-5p mature miRNA
Sequence 18 - CAUAAAGUAGAAAGCACUACU - 38
Evidence experimental
Illumina [1]

Mature cli-miR-142-3p

Accession MIMAT0038530
Description Columba livia cli-miR-142-3p mature miRNA
Sequence 57 - UAGUGUUUCCUACUUUAUGGA - 77
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196