miRBase entry: cli-mir-126

Stem-loop cli-mir-126


Accession
MI0029958
Description
Columba livia cli-mir-126 precursor miRNA


Sequence

accgcuggugacggccCAUUAUUACUUUUGGUACGCGCugugacacuucaaacUCGUACCGUGAGUAAUAAUGCGcuguggccagcacg
...((((((.(((((.(((((((((((.(((((((.....(((....)))....))))))).))))))))))).))))).))))))...

Structure
acc      g     c           U       CGCug   c 
   gcuggu acggc CAUUAUUACUU UGGUACG     uga a
   |||||| ||||| ||||||||||| |||||||     |||  
   cgaccg ugucG GUAAUAAUGAG GCCAUGC     acu c
gca      g     C           U       -Ucaa   u 


Annotation confidence Not enough data
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Genome context
KB375962.1: 1958252-1958340 [-]

Database links

Mature cli-miR-126-5p

Accession MIMAT0038499
Description Columba livia cli-miR-126-5p mature miRNA
Sequence 17 - CAUUAUUACUUUUGGUACGCGC - 38
Evidence experimental
Illumina [1]

Mature cli-miR-126-3p

Accession MIMAT0038500
Description Columba livia cli-miR-126-3p mature miRNA
Sequence 54 - UCGUACCGUGAGUAAUAAUGCG - 75
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196