miRBase entry: cli-mir-124-2

Stem-loop cli-mir-124-2


Accession
MI0029955
Description
Columba livia cli-mir-124-2 precursor miRNA


Sequence

cccgagccccucucugCGUGUUCACAGCGGACCUUGAUuuaauguccauacaauUAAGGCACGCGGUGAAUGCCAAgagaggagccucaca
...((((.(((((((..((((((((.(((..((((((((............))))))))..))).))))))))..))))))).).)))...

Structure
ccc   - c       gC        A   GA        uaaug 
   gag c ccucucu  GUGUUCAC GCG  CCUUGAUu     u
   ||| | |||||||  |||||||| |||  ||||||||      
   cuc g ggagagA  CGUAAGUG CGC  GGAAUuaa     c
aca   c a       AC        G   AC        cauac 


Annotation confidence Not enough data
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Genome context
KB375315.1: 2496168-2496258 [-]

Database links

Mature cli-miR-124-3p

Accession MIMAT0038494
Description Columba livia cli-miR-124-3p mature miRNA
Sequence 55 - UAAGGCACGCGGUGAAUGCCAA - 76
Evidence experimental
Illumina [1]

Mature cli-miR-124-2-5p

Accession MIMAT0038495
Description Columba livia cli-miR-124-2-5p mature miRNA
Sequence 17 - CGUGUUCACAGCGGACCUUGAU - 38
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196