Stem-loop cli-mir-107

Accession

MI0029952

Description

Columba livia cli-mir-107 precursor miRNA

Sequence

guguucucuuugcuuucAGCUUCUUUACAGUGUUGCCUUGuggcauggaguucaAGCAGCAUUGUACAGGGCUAUcaaagcaugg
.......((.((((((.((((.((.(((((((((((.(((.(((.....))))))))))))))))).))))))...)))))).))

Structure

guguucu  u      --c    U  U           C   u   a 
       cu ugcuuu   AGCU CU UACAGUGUUGC UUG ggc u
       || ||||||   |||| || ||||||||||| ||| ||| g
       gg acgaaa   UCGG GA AUGUUACGACG Aac uug g
-------  u      cUA    -  C           -   -   a 

Annotation confidence Not enough data

Genome context

KB375396.1: 365360-365444 [-]

Mature cli-miR-107-5p

• Accession: MIMAT0038489
• Description: Columba livia cli-miR-107-5p mature miRNA
• Sequence: 18 - AGCUUCUUUACAGUGUUGCCUUG - 40
• Evidence: experimental ; Illumina [1]

Mature cli-miR-107-3p

• Accession: MIMAT0038490
• Description: Columba livia cli-miR-107-3p mature miRNA
• Sequence: 55 - AGCAGCAUUGUACAGGGCUAU - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196