miRBase entry: cli-mir-101-1

Stem-loop cli-mir-101-1


Accession
MI0029947
Description
Columba livia cli-mir-101-1 precursor miRNA


Sequence

acaggcugcccuggcUCAGUUAUCACAGUGCUGAUGCUgucucuuguaaaggUACAGUACUGUGAUAACUGAAggauggcagccauc
...(((((((.....((((((((((((((((((.((((............)))))))))))))))))))))).....)))))))...

Structure
aca       cuggc                  A    gucuc 
   ggcugcc     UCAGUUAUCACAGUGCUG UGCU     u
   |||||||     |||||||||||||||||| ||||      
   ccgacgg     AGUCAAUAGUGUCAUGAC AUgg     u
cua       uaggA                  -    aaaug 


Annotation confidence Not enough data
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Genome context
KB375307.1: 15720695-15720781 [-]

Database links

Mature cli-miR-101-5p

Accession MIMAT0038482
Description Columba livia cli-miR-101-5p mature miRNA
Sequence 16 - UCAGUUAUCACAGUGCUGAUGCU - 38
Evidence experimental
Illumina [1]

Mature cli-miR-101-3p

Accession MIMAT0038483
Description Columba livia cli-miR-101-3p mature miRNA
Sequence 53 - UACAGUACUGUGAUAACUGAA - 73
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196