Stem-loop cli-mir-30d

Accession

MI0029933

Description

Columba livia cli-mir-30d precursor miRNA

Sequence

cgugguccggugcUGUAAACAUCCCCGACUGGAAGCUguucccguccagCUUUCAGUCAGAUGUUUGCUGCaccuggcugcg
(((((((.(((((.(((((((((...((((((((((((........)))))))))))).))))))))).))))).)))))))

Structure

       c     U         CCC            uuc 
cgugguc ggugc GUAAACAUC   GACUGGAAGCUg   c
||||||| ||||| |||||||||   ||||||||||||    
gcgucgg ccaCG CGUUUGUAG   CUGACUUUCgac   c
       u     U         --A            cug 

Annotation confidence Not enough data

Genome context

KB375768.1: 3168624-3168705 [-]

Mature cli-miR-30d-5p

• Accession: MIMAT0038456
• Description: Columba livia cli-miR-30d-5p mature miRNA
• Sequence: 14 - UGUAAACAUCCCCGACUGGAAGCU - 37
• Evidence: experimental ; Illumina [1]

Mature cli-miR-30d-3p

• Accession: MIMAT0038457
• Description: Columba livia cli-miR-30d-3p mature miRNA
• Sequence: 50 - CUUUCAGUCAGAUGUUUGCUGC - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196