miRBase entry: cli-mir-30c-2

Stem-loop cli-mir-30c-2


Accession
MI0029932
Description
Columba livia cli-mir-30c-2 precursor miRNA


Sequence

ugacagguacUGUAAACAUCCUACACUCUCAGCUguggaaacuaagaaagCUGGGAGAAGGCUGUUUACUCUcccugcc
...((((....(((((((.(((...(((((((((..............))))))))).))).)))))))....))))..

Structure
uga    uacU       U   ACA         guggaa 
   cagg    GUAAACA CCU   CUCUCAGCU      a
   ||||    ||||||| |||   |||||||||       
   gucc    CAUUUGU GGA   GAGGGUCga      c
-cc    cUCU       C   --A         aagaau 


Annotation confidence Not enough data
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Genome context
KB375528.1: 5128891-5128969 [+]

Database links

Mature cli-miR-30c-5p

Accession MIMAT0038453
Description Columba livia cli-miR-30c-5p mature miRNA
Sequence 11 - UGUAAACAUCCUACACUCUCAGCU - 34
Evidence experimental
Illumina [1]

Mature cli-miR-30c-2-3p

Accession MIMAT0038455
Description Columba livia cli-miR-30c-2-3p mature miRNA
Sequence 51 - CUGGGAGAAGGCUGUUUACUCU - 72
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196