miRBase entry: cli-mir-26-2

Stem-loop cli-mir-26-2


Accession
MI0029924
Description
Columba livia cli-mir-26-2 precursor miRNA


Sequence

caguggccggccccaggUUCAAGUAAUCCAGGAUAGGCUgugaucugggcagucagCCUGUUCUUGGUUACUUGGCUCuggagcuggccagau
...((((((((.(((((.((((((((((.(((((((((((.............))))))))))).)))))))))).))))).))))))))...

Structure
cag        c     U          C           ugauc 
   uggccggc ccagg UCAAGUAAUC AGGAUAGGCUg     u
   |||||||| ||||| |||||||||| |||||||||||     g
   accggucg gguCU GGUUCAUUGG UCUUGUCCgac     g
uag        a     C          U           ugacg 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
KB375305.1: 1151281-1151373 [+]

Database links

Mature cli-miR-26-5p

Accession MIMAT0038442
Description Columba livia cli-miR-26-5p mature miRNA
Sequence 18 - UUCAAGUAAUCCAGGAUAGGCU - 39
Evidence experimental
Illumina [1]

Mature cli-miR-26-2-3p

Accession MIMAT0038444
Description Columba livia cli-miR-26-2-3p mature miRNA
Sequence 57 - CCUGUUCUUGGUUACUUGGCUC - 78
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196