miRBase entry: cli-mir-22

Stem-loop cli-mir-22


Accession
MI0029921
Description
Columba livia cli-mir-22 precursor miRNA


Sequence

cagcaccAGUUCUUCAGUGGCAAGCUUUAuguccuucucuaguagcuaAAGCUGCCAGUUGAAGAACUGUugaau
...((.((((((((((((((((.((((((..(.((.....)).)..))))))))))).))))))))))).))...

Structure
cag  c           -     A      ug c  u 
   ca cAGUUCUUCAG UGGCA GCUUUA  u cu c
   || ||||||||||| ||||| ||||||  | || u
   gu GUCAAGAAGUU ACCGU CGAAau  a ga c
uaa  U           G     -      cg u  u 


Annotation confidence Not enough data
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Genome context
KB375376.1: 2621547-2621621 [-]

Database links

Mature cli-miR-22-5p

Accession MIMAT0038438
Description Columba livia cli-miR-22-5p mature miRNA
Sequence 8 - AGUUCUUCAGUGGCAAGCUUUA - 29
Evidence experimental
Illumina [1]

Mature cli-miR-22-3p

Accession MIMAT0038439
Description Columba livia cli-miR-22-3p mature miRNA
Sequence 49 - AAGCUGCCAGUUGAAGAACUGU - 70
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196