miRBase entry: cli-let-7b

Stem-loop cli-let-7b


Accession
MI0029886
Description
Columba livia cli-let-7b precursor miRNA


Sequence

ggaugagguaguagguugugugguuucaggguagugauuuugccccagucaggagauaaCUAUACAACCUACUGCCUUCCcugauaagcagcauaacaac
(((..((((((((((((((((((((...((((((.....))))))..(((....))))))))))))))))))))))))))(((.....))).........

Structure
--------------------   ug                    ---------uca      u 
                    gga  agguaguagguugugugguu            ggguag g
                    |||  ||||||||||||||||||||            |||||| a
                    CCU  UCCGUCAUCCAACAUAUCaa            cccguu u
caacaauacgacgaauaguc   --                    uagaggacugac      u 


Annotation confidence Not enough data
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Genome context
KB375672.1: 359882-359981 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cli-let-7b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cli-let-7b-3p

Accession MIMAT0038378
Description Columba livia cli-let-7b-3p mature miRNA
Sequence 60 - CUAUACAACCUACUGCCUUCC - 80
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196