Stem-loop ami-mir-9601

Accession

MI0029868

Description

Alligator mississippiensis ami-mir-9601 precursor miRNA

Sequence

ggugucaggaagCAGUGGACAAUGAAGAAUGCAgugcaacaacaguaagugCAUGUCUCAUUGUCCAUUGCUUccugauguc
...((((((((((((((((((((((.(((((((.(((.......)))..))))).))))))))))))))))))))))))...

Structure

ggu                      A  -     -g   aa 
   gucaggaagCAGUGGACAAUGA GA AUGCA  ugc  c
   |||||||||||||||||||||| || |||||  |||  a
   uaguccUUCGUUACCUGUUACU CU UACgu  aug  a
cug                      -  G     ga   ac 

Annotation confidence Not enough data

Genome context

AKHW03000230.1: 2678415-2678496 [-]

Mature ami-miR-9601-5p

• Accession: MIMAT0038346
• Description: Alligator mississippiensis ami-miR-9601-5p mature miRNA
• Sequence: 13 - CAGUGGACAAUGAAGAAUGCA - 33
• Evidence: experimental ; Illumina [1]

Mature ami-miR-9601-3p

• Accession: MIMAT0038347
• Description: Alligator mississippiensis ami-miR-9601-3p mature miRNA
• Sequence: 52 - CAUGUCUCAUUGUCCAUUGCUU - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196