Stem-loop ami-mir-9600

Accession

MI0029867

Description

Alligator mississippiensis ami-mir-9600 precursor miRNA

Sequence

gguugggagagguUUUAGACAAGCUGUUGAGCCCAGuggaagagcacuucAUGGCCAAUAGUUUGUCUAAAAUcucucccaacc
(((((((((((((((((((((((((((((.(((.((((......))))....))))))))))))))))))))))))))))))))

Structure

                             A   ---C    ga 
gguugggagagguUUUAGACAAGCUGUUG GCC    AGug  a
||||||||||||||||||||||||||||| |||    ||||   
ccaacccucucUAAAAUCUGUUUGAUAAC CGG    ucac  g
                             -   UAcu    ga 

Annotation confidence Not enough data

Genome context

AKHW03001467.1: 14436142-14436225 [-]

Mature ami-miR-9600-5p

• Accession: MIMAT0038344
• Description: Alligator mississippiensis ami-miR-9600-5p mature miRNA
• Sequence: 14 - UUUAGACAAGCUGUUGAGCCCAG - 36
• Evidence: experimental ; Illumina [1]

Mature ami-miR-9600-3p

• Accession: MIMAT0038345
• Description: Alligator mississippiensis ami-miR-9600-3p mature miRNA
• Sequence: 51 - AUGGCCAAUAGUUUGUCUAAAAU - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196