Stem-loop ami-mir-1791

Accession

MI0029857

Description

Alligator mississippiensis ami-mir-1791 precursor miRNA

Sequence

ugaugcaccauguUGGGCUGCCUCAGUCAUGCCAUGuuaugaaaccuaaugCAAUGUGACUGAUGCAGGCUGACgugauguguca
(((((((.((((((((.((((.(((((((((...(((.((........))))).))))))))).)))).)))))))).)))))))

Structure

       c        G    C         CCA   u  gaa 
ugaugca cauguUGG CUGC UCAGUCAUG   UGu au   a
||||||| |||||||| |||| |||||||||   ||| ||    
acugugu gugCAGUC GACG AGUCAGUGU   ACg ua   c
       a        G    U         --A   -  auc 

Annotation confidence Not enough data

Genome context

AKHW03003905.1: 1986165-1986249 [+]

Mature ami-miR-1791-5p

• Accession: MIMAT0038327
• Description: Alligator mississippiensis ami-miR-1791-5p mature miRNA
• Sequence: 14 - UGGGCUGCCUCAGUCAUGCCAUG - 36
• Evidence: experimental ; Illumina [1]

Mature ami-miR-1791-3p

• Accession: MIMAT0038328
• Description: Alligator mississippiensis ami-miR-1791-3p mature miRNA
• Sequence: 52 - CAAUGUGACUGAUGCAGGCUGAC - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196