Stem-loop ami-mir-204-2

Accession

MI0029790

Description

Alligator mississippiensis ami-mir-204-2 precursor miRNA

Sequence

gaccaugugaccugugggcUUCCCUUUGUCAUCCUAUGCCUggagaucauagugagGCAGGGACAACAAAGGGAUGCucaauugucaucucgugcaucgg
((.((((((((...(((((.(((((((((..((((.(((((.............)))))))))..))))))))).)))))...))))...))))..))..

Structure

--  -c    ---    cug     U         CA    A     ggaga 
  ga  caug   ugac   ugggc UCCCUUUGU  UCCU UGCCU     u
  ||  ||||   ||||   ||||| |||||||||  |||| |||||     c
  cu  gugc   acug   acuCG AGGGAAACA  AGGG ACGga     a
gg  ac    ucu    uua     U         AC    -     gugau 

Annotation confidence Not enough data

Genome context

AKHW03006295.1: 32217599-32217698 [+]

Mature ami-miR-204-5p

• Accession: MIMAT0038225
• Description: Alligator mississippiensis ami-miR-204-5p mature miRNA
• Sequence: 20 - UUCCCUUUGUCAUCCUAUGCCU - 41
• Evidence: experimental ; Illumina [1]

Mature ami-miR-204-2-3p

• Accession: MIMAT0038227
• Description: Alligator mississippiensis ami-miR-204-2-3p mature miRNA
• Sequence: 57 - GCAGGGACAACAAAGGGAUGC - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196