Stem-loop ami-mir-190a

Accession

MI0029771

Description

Alligator mississippiensis ami-mir-190a precursor miRNA

Sequence

aggacucugugUGAUAUGUUUGAUAUAUUAGGuuguuauuuaauccaACUAUAUAUCAAACAUAUUCCUacaguguccugcccu
(((((.(((((.((((((((((((((((..(((((..........)))))))))))))))))))))..))))).))))).....

Structure

-----     u     -U                UA     uuau 
     aggac cugug  GAUAUGUUUGAUAUAU  GGuug    u
     ||||| |||||  ||||||||||||||||  |||||     
     uccug gacaU  UUAUACAAACUAUAUA  UCAac    u
ucccg     u     CC                --     cuaa 

Annotation confidence Not enough data

Genome context

AKHW03006295.1: 29297064-29297147 [-]

Mature ami-miR-190a-5p

• Accession: MIMAT0038202
• Description: Alligator mississippiensis ami-miR-190a-5p mature miRNA
• Sequence: 12 - UGAUAUGUUUGAUAUAUUAGG - 32
• Evidence: experimental ; Illumina [1]

Mature ami-miR-190a-3p

• Accession: MIMAT0038203
• Description: Alligator mississippiensis ami-miR-190a-3p mature miRNA
• Sequence: 48 - ACUAUAUAUCAAACAUAUUCCU - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196