Stem-loop ami-mir-155

Accession

MI0029760

Description

Alligator mississippiensis ami-mir-155 precursor miRNA

Sequence

guaggcuguauguugUUAAUGCUAAUCGUGAUAGGGguuuuaccucugacugacuccuacauguuagcauuagcacuguaugaugccuguuacc
.(((((.(((((.((((((((((((.((((.((((((((............)))))))))))))))))))))))).)))))...))))).....

Structure

----g     --u     u            U    A        uuacc 
     uaggc   guaug ugUUAAUGCUAA CGUG UAGGGguu     u
     |||||   ||||| |||||||||||| |||| ||||||||      
     guccg   uaugu acgauuacgauu guac auccucag     c
ccauu     uag     c            -    -        ucagu 

Annotation confidence Not enough data

Genome context

AKHW03006231.1: 43681789-43681882 [+]

Mature ami-miR-155-5p

• Accession: MIMAT0038185
• Description: Alligator mississippiensis ami-miR-155-5p mature miRNA
• Sequence: 16 - UUAAUGCUAAUCGUGAUAGGG - 36
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196