Stem-loop ami-mir-152

Accession

MI0029757

Description

Alligator mississippiensis ami-mir-152 precursor miRNA

Sequence

guccucucagcucAGGUUCUGUGGUACACUUGGACucggacucuggagcagUCAGUGCAUGACAGAACUUGGguuuggauggac
(((((((.((((((((((((((.((.((((.((.(((........)))...)))))).)).)))))))))))))).))).))))

Structure

    -   c              G  A    U  --A   gga 
gucc ucu agcucAGGUUCUGU GU CACU GG   Cuc   c
|||| ||| |||||||||||||| || |||| ||   |||    
cagg agg uugGGUUCAAGACA UA GUGA CU   gag   u
    u   u              G  C    -  gac   guc 

Annotation confidence Not enough data

Genome context

AKHW03000817.1: 2942464-2942547 [-]

Mature ami-miR-152-5p

• Accession: MIMAT0038182
• Description: Alligator mississippiensis ami-miR-152-5p mature miRNA
• Sequence: 14 - AGGUUCUGUGGUACACUUGGAC - 35
• Evidence: experimental ; Illumina [1]

Mature ami-miR-152-3p

• Accession: MIMAT0038183
• Description: Alligator mississippiensis ami-miR-152-3p mature miRNA
• Sequence: 52 - UCAGUGCAUGACAGAACUUGG - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196