Stem-loop ami-mir-148b

Accession

MI0029755

Description

Alligator mississippiensis ami-mir-148b precursor miRNA

Sequence

uugaggcgGAGUUCUGUCAUACACUCGGACugugcuaccuggggUCAGUGCAUCACAGAACUUUGucucgagcgc
(((((((((((((((((.((.((((..((((.(.......).)))))))).)).)))))))))))))))))....

Structure

----                 C  A    CG    g gc 
    uugaggcgGAGUUCUGU AU CACU  GACu u  u
    ||||||||||||||||| || ||||  |||| |  a
    agcucuGUUUCAAGACA UA GUGA  CUgg g  c
cgcg                 C  C    --    g uc 

Annotation confidence Not enough data

Genome context

AKHW03004993.1: 40032-40106 [+]

Mature ami-miR-148b-5p

• Accession: MIMAT0038178
• Description: Alligator mississippiensis ami-miR-148b-5p mature miRNA
• Sequence: 9 - GAGUUCUGUCAUACACUCGGAC - 30
• Evidence: experimental ; Illumina [1]

Mature ami-miR-148b-3p

• Accession: MIMAT0038179
• Description: Alligator mississippiensis ami-miR-148b-3p mature miRNA
• Sequence: 45 - UCAGUGCAUCACAGAACUUUG - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196