Stem-loop ami-mir-138-1

Accession

MI0029742

Description

Alligator mississippiensis ami-mir-138-1 precursor miRNA

Sequence

ucuggaugguacagugcugcAGCUGGUGUUGUGAAUCAGGCcgucaccgaucagagaacgGCUACUUCACAACACCAGGGUugcacccuaccacagucaa
.(((..(((((..((((.((..(((((((((((((...((((((...(.....)...))))))..))))))))))))).)).))))..))))))))....

Structure

---u   ga     ca    u  AG             UCA      cac g 
    cug  uggua  gugc gc  CUGGUGUUGUGAA   GGCcgu   c a
    |||  |||||  |||| ||  |||||||||||||   ||||||   | u
    gac  accau  cacg UG  GACCACAACACUU   UCGgca   g c
aacu   --     cc    u  -G             -CA      aga a 

Annotation confidence Not enough data

Genome context

AKHW03005461.1: 38580976-38581075 [-]

Mature ami-miR-138-5p

• Accession: MIMAT0038155
• Description: Alligator mississippiensis ami-miR-138-5p mature miRNA
• Sequence: 21 - AGCUGGUGUUGUGAAUCAGGC - 41
• Evidence: experimental ; Illumina [1]

Mature ami-miR-138-3p

• Accession: MIMAT0038156
• Description: Alligator mississippiensis ami-miR-138-3p mature miRNA
• Sequence: 61 - GCUACUUCACAACACCAGGGU - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196