Stem-loop ami-mir-128-2

Accession

MI0029726

Description

Alligator mississippiensis ami-mir-128-2 precursor miRNA

Sequence

ugugcaguuggaagGGGGGCCGUUACACUGUAAGAGAgugaguagcaggucUCACAGUGAACCGGUCUCUUUuccuacugugucgugu
...(((((.(((((((((((((...((((((..((((.(........).))))))))))...))))))))))))).))))).......

Structure

----ugu     u             UUA      AA    g gag 
       gcagu ggaagGGGGGCCG   CACUGU  GAGA u   u
       ||||| |||||||||||||   ||||||  |||| |    
       uguca ccuUUUCUCUGGC   GUGACA  CUcu g   a
ugugcug     u             CAA      --    g acg 

Annotation confidence Not enough data

Genome context

AKHW03001210.1: 24805008-24805095 [-]

Mature ami-miR-128-3p

• Accession: MIMAT0038134
• Description: Alligator mississippiensis ami-miR-128-3p mature miRNA
• Sequence: 52 - UCACAGUGAACCGGUCUCUUU - 72
• Evidence: experimental ; Illumina [1]

Mature ami-miR-128-2-5p

• Accession: MIMAT0038135
• Description: Alligator mississippiensis ami-miR-128-2-5p mature miRNA
• Sequence: 15 - GGGGGCCGUUACACUGUAAGAGA - 37
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196