Stem-loop ami-mir-26-1

Accession

MI0029682

Description

Alligator mississippiensis ami-mir-26-1 precursor miRNA

Sequence

aaggcuguuaccuggUUCAAGUAAUCCAGGAUAGGCUguaugcauugcaguuggCCUAUUCUUGAUUACUUGCACUgggagacagccaca
..(((((((.((((((.(((((((((.(((((((((((..(((...)))..))))))))))).))))))))).)))))).)))))))...

Structure

-aa       a      U         C           ua   a 
   ggcuguu ccuggU CAAGUAAUC AGGAUAGGCUg  ugc  
   ||||||| |||||| ||||||||| |||||||||||  ||| u
   ccgacag gggUCA GUUCAUUAG UCUUAUCCggu  acg  
aca       a      C         U           ug   u 

Annotation confidence Not enough data

Genome context

AKHW03000487.1: 27325040-27325129 [-]

Mature ami-miR-26-5p

• Accession: MIMAT0038064
• Description: Alligator mississippiensis ami-miR-26-5p mature miRNA
• Sequence: 16 - UUCAAGUAAUCCAGGAUAGGCU - 37
• Evidence: experimental ; Illumina [1]

Mature ami-miR-26-3p

• Accession: MIMAT0038065
• Description: Alligator mississippiensis ami-miR-26-3p mature miRNA
• Sequence: 55 - CCUAUUCUUGAUUACUUGCACU - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196