Stem-loop ami-mir-7a-3

Accession

MI0029657

Description

Alligator mississippiensis ami-mir-7a-3 precursor miRNA

Sequence

gucgucuggcucugcgUGGAAGACUAGUGAUUUUGUUGUucugacuuauaaaggugacaacaaaucauagccugccauacagcacagacucgca
...(((((...(((.((((.((.(((.((((((.((((((...((((....))))))))))))))))))).)).)))).)))..))))).....

Structure

--guc     gcu   c    A  A   G      U      cug    a 
     gucug   cug gUGG AG CUA UGAUUU GUUGUu   acuu u
     |||||   ||| |||| || ||| |||||| ||||||   ||||  
     cagac   gac uacc uc gau acuaaa caacag   ugga a
acgcu     -ac   a    g  c   -      -      ---    a 

Annotation confidence Not enough data

Genome context

AKHW03001382.1: 115141-115234 [+]

Mature ami-miR-7a-5p

• Accession: MIMAT0038023
• Description: Alligator mississippiensis ami-miR-7a-5p mature miRNA
• Sequence: 17 - UGGAAGACUAGUGAUUUUGUUGU - 39
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196