Stem-loop cpi-mir-9582

Accession

MI0029619

Description

Chrysemys picta cpi-mir-9582 precursor miRNA

Sequence

gcauugcccugcaUCUUGUGUAGUUCUUUAGCAUuuucuacccauuuugcacagauGUAAAUAACUACACAAGGUGCagggcaguggaagug
.((((((((((((((((((((((((.((((.(((((................))))))))).))))))))))))))))))))))))......

Structure

-----g                        C    G     ucuaccc 
      cauugcccugcaUCUUGUGUAGUU UUUA CAUuu       a
      |||||||||||||||||||||||| |||| |||||        
      gugacgggaCGUGGAACACAUCAA AAAU Guaga       u
gugaag                        U    -     cacguuu 

Annotation confidence Not enough data

Genome context

KK082916.1: 8506501-8506592 [+]

Mature cpi-miR-9582-5p

• Accession: MIMAT0037960
• Description: Chrysemys picta cpi-miR-9582-5p mature miRNA
• Sequence: 14 - UCUUGUGUAGUUCUUUAGCAU - 34
• Evidence: experimental ; Illumina [1]

Mature cpi-miR-9582-3p

• Accession: MIMAT0037961
• Description: Chrysemys picta cpi-miR-9582-3p mature miRNA
• Sequence: 57 - GUAAAUAACUACACAAGGUGC - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196