Stem-loop cpi-mir-203

Accession

MI0029527

Description

Chrysemys picta cpi-mir-203 precursor miRNA

Sequence

gcgggcagccuccuuggugcAGUGGUUCUUAACAGUUCAACAGuucucuagcauaauuGUGAAAUGUUUAGGACCACUUGAccaggaaggcccggg
.(((((....((((.(((..(((((((((.((((.((((.(((((.........))))))))).)))).)))))))))..)))))))..)))))..

Structure

-g     agcc    u   gc         U    G    A     cuc 
  cgggc    uccu ggu  AGUGGUUCU AACA UUCA CAGuu   u
  |||||    |||| |||  ||||||||| |||| |||| |||||   a
  gcccg    agga ccA  UCACCAGGA UUGU AAGU Guuaa   g
gg     --ga    -   GU         U    A    -     uac 

Annotation confidence Not enough data

Genome context

KK082923.1: 4391809-4391904 [-]

Mature cpi-miR-203-5p

• Accession: MIMAT0037825
• Description: Chrysemys picta cpi-miR-203-5p mature miRNA
• Sequence: 21 - AGUGGUUCUUAACAGUUCAACAG - 43
• Evidence: experimental ; Illumina [1]

Mature cpi-miR-203-3p

• Accession: MIMAT0037826
• Description: Chrysemys picta cpi-miR-203-3p mature miRNA
• Sequence: 59 - GUGAAAUGUUUAGGACCACUUGA - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196