Stem-loop cpi-mir-152

Accession

MI0029495

Description

Chrysemys picta cpi-mir-152 precursor miRNA

Sequence

guccucucggcccAGGUUCUGUGGUACACUUGGACUuggacucuggagcagUCAGUGCAUGACAGAACUUGGguuuggauggacccu
(((((((.((((((((((((((.((.((((..((((.(..........))))))))).)).)))))))))))))).))).))))...

Structure

---    -   c              G  A    UG    u gacu 
   gucc ucu ggcccAGGUUCUGU GU CACU  GACU g    c
   |||| ||| |||||||||||||| || ||||  |||| |     
   cagg agg uugGGUUCAAGACA UA GUGA  CUga c    u
ucc    u   u              G  C    --    - gagg 

Annotation confidence Not enough data

Genome context

KK088207.1: 3033148-3033234 [+]

Mature cpi-miR-152-5p

• Accession: MIMAT0037785
• Description: Chrysemys picta cpi-miR-152-5p mature miRNA
• Sequence: 14 - AGGUUCUGUGGUACACUUGGACU - 36
• Evidence: experimental ; Illumina [1]

Mature cpi-miR-152-3p

• Accession: MIMAT0037786
• Description: Chrysemys picta cpi-miR-152-3p mature miRNA
• Sequence: 52 - UCAGUGCAUGACAGAACUUGG - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196