Stem-loop cpi-mir-103-2

Accession

MI0029450

Description

Chrysemys picta cpi-mir-103-2 precursor miRNA

Sequence

agcucugugcuuucAGCUUCUUUACAGUGCUGCCUUGUugcauucaugucaAGCAGCAUUGUACAGGGCUAUgaaagaacugagacccguuc
..(((.((.(((((((((.((.(((((((((((.(((..(((....))))))))))))))))).)))))..)))))).)).)))........

Structure

------ag   u  g      --   U  U           C   Uu   u 
        cuc gu cuuucA  GCU CU UACAGUGCUGC UUG  gca u
        ||| || ||||||  ||| || ||||||||||| |||  |||  
        gag ca gaaagU  CGG GA AUGUUACGACG Aac  ugu c
cuugccca   u  a      AU   -  C           -   --   a 

Annotation confidence Not enough data

Genome context

KK082944.1: 6461372-6461463 [+]

Mature cpi-miR-103-3p

• Accession: MIMAT0037719
• Description: Chrysemys picta cpi-miR-103-3p mature miRNA
• Sequence: 52 - AGCAGCAUUGUACAGGGCUAU - 72
• Evidence: experimental ; Illumina [1]

Mature cpi-miR-103-5p

• Accession: MIMAT0037720
• Description: Chrysemys picta cpi-miR-103-5p mature miRNA
• Sequence: 15 - AGCUUCUUUACAGUGCUGCCUUGU - 38
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196