Stem-loop cpi-mir-26-3

Accession

MI0029417

Description

Chrysemys picta cpi-mir-26-3 precursor miRNA

Sequence

cggaggccggcgccgggUUCAAGUAAUCCAGGAUAGGCUguggucugcgcagucggCCUGUUCUCGAUUACUUGGCGCcggagccggccggcagcu
.(..(((((((.((((..((((((((((.(((((((((((..((....))...))))))))))).))))))))))..)))).)))))))..)....

Structure

---c ga       g    gU          C           -ug  c 
    g  ggccggc ccgg  UCAAGUAAUC AGGAUAGGCUg   gu u
    |  ||||||| ||||  |||||||||| |||||||||||   ||  
    c  ccggccg ggcC  GGUUCAUUAG UCUUGUCCggc   cg g
ucga gg       a    GC          C           uga  c 

Annotation confidence Not enough data

Genome context

KK082919.1: 1627705-1627800 [-]

Mature cpi-miR-26-5p

• Accession: MIMAT0037660
• Description: Chrysemys picta cpi-miR-26-5p mature miRNA
• Sequence: 18 - UUCAAGUAAUCCAGGAUAGGCU - 39
• Evidence: experimental ; Illumina [1]

Mature cpi-miR-26-3-3p

• Accession: MIMAT0037663
• Description: Chrysemys picta cpi-miR-26-3-3p mature miRNA
• Sequence: 57 - CCUGUUCUCGAUUACUUGGCGC - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196