Stem-loop cpi-let-7g

Accession

MI0029382

Description

Chrysemys picta cpi-let-7g precursor miRNA

Sequence

uccaggcUGAGGUAGUAGUUUGUACAGUUugagggucuaugauaccacccgguacaggagauaaCUGUACAGGCCACUGCCUUGCcuggga
(((((((.((((((((.((((((((((((.....((((.((.((((....))))))..)))))))))))))))).))))))))))))))).

Structure

-       U        A            ugagg    -a  a    a 
 uccaggc GAGGUAGU GUUUGUACAGUU     gucu  ug uacc c
 ||||||| |||||||| ||||||||||||     ||||  || ||||  
 gggucCG UUCCGUCA CGGACAUGUCaa     uaga  ac augg c
a       -        C            -----    gg  -    c 

Annotation confidence Not enough data

Genome context

KK083011.1: 2949169-2949259 [+]

Mature cpi-let-7g-5p

• Accession: MIMAT0037608
• Description: Chrysemys picta cpi-let-7g-5p mature miRNA
• Sequence: 8 - UGAGGUAGUAGUUUGUACAGUU - 29
• Evidence: experimental ; Illumina [1]

Mature cpi-let-7g-3p

• Accession: MIMAT0037609
• Description: Chrysemys picta cpi-let-7g-3p mature miRNA
• Sequence: 65 - CUGUACAGGCCACUGCCUUGC - 85
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196