Stem-loop aca-mir-9573

Accession

MI0029361

Description

Anolis carolinensis aca-mir-9573 precursor miRNA

Sequence

ugaaauaaagugacAUGGACAAUUUUGGUUUUGAUGuuuaaugaguaUCAAAACUAGGAUUGUCUAUGCcauuguguuuc
.((((((.((((.((((((((((((((((((((((((((...)))))))))))))))))))))))))).)))).))))))

Structure

u      a    a                          a 
 gaaaua agug cAUGGACAAUUUUGGUUUUGAUGuuu  
 |||||| |||| |||||||||||||||||||||||||| a
 cuuugu uuac GUAUCUGUUAGGAUCAAAACUaugag  
-      g    C                          u 

Annotation confidence Not enough data

Genome context

chr3: 176359707-176359786 [-]

Mature aca-miR-9573-5p

• Accession: MIMAT0037578
• Description: Anolis carolinensis aca-miR-9573-5p mature miRNA
• Sequence: 15 - AUGGACAAUUUUGGUUUUGAUG - 36
• Evidence: experimental ; Illumina [1]

Mature aca-miR-9573-3p

• Accession: MIMAT0037579
• Description: Anolis carolinensis aca-miR-9573-3p mature miRNA
• Sequence: 48 - UCAAAACUAGGAUUGUCUAUGC - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196