Stem-loop aca-let-7a-2

Accession

MI0029348

Description

Anolis carolinensis aca-let-7a-2 precursor miRNA

Literature search

1 open access papers mention aca-let-7a-2
(1 sentences)

Sequence

aggUGAGGUAGUAGGUUGUAUAGUUugugggagggauuacaucccauuucaggugauaaCUAUACAGUCUAUUGCCUUCCUua
(((.((((((((((((((((((((((.((((((((((...))))).))))).)....))))))))))))))))))))))))..

Structure

--   U                     ---- g     -     u 
  agg GAGGUAGUAGGUUGUAUAGUU    u uggga gggau  
  ||| |||||||||||||||||||||    | ||||| ||||| a
  UCC UUCCGUUAUCUGACAUAUCaa    g acuuu cccua  
au   -                     uagu g     a     c 

Annotation confidence Not enough data

Genome context

chr4: 123683312-123683394 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from aca-let-7a-2

Mature aca-let-7a-5p

• Accession: MIMAT0021692
• Description: Anolis carolinensis aca-let-7a-5p mature miRNA
• Sequence: 4 - UGAGGUAGUAGGUUGUAUAGUU - 25
• Evidence: experimental ; Illumina [1]

Mature aca-let-7a-2-3p

• Accession: MIMAT0037559
• Description: Anolis carolinensis aca-let-7a-2-3p mature miRNA
• Sequence: 60 - CUAUACAGUCUAUUGCCUUCCU - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196