Stem-loop gga-mir-203b

Accession

MI0029341

Description

Gallus gallus gga-mir-203b precursor miRNA

Literature search

16 open access papers mention gga-mir-203b
(151 sentences)

Sequence

7 reads, 1 reads per million, 3 experiments

cgggccucgcuggucaagugguccuaaacauuucacaauuaugauagagaacugUUGAACUGUUAAGAACCACUGCaccaaggaggcugagg
..((((((..((((..((((((.((.((((.((((........((((....)))))))).)))).)).))))))..))))..))))))....

Structure

--cg      gc    ca      c  a    u    caauuaug    a 
    ggccuc  uggu  aguggu cu aaca uuca        auag g
    ||||||  ||||  |||||| || |||| ||||        ||||  
    ucggag  acca  UCACCA GA UUGU AAGU        Uguc a
ggag      ga    CG      A  A    C    --------    a 

Annotation confidence Not enough data

Genome context

chr5: 50769282-50769373 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from gga-mir-203b

Mature gga-miR-203b-3p

• Accession: MIMAT0037548
• Description: Gallus gallus gga-miR-203b-3p mature miRNA
• Sequence: 55 - UUGAACUGUUAAGAACCACUGC - 76
• Evidence: not_experimental

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196