Stem-loop gga-mir-33-2

Accession

MI0029334

Description

Gallus gallus gga-mir-33-2 precursor miRNA

Literature search

8 open access papers mention gga-mir-33-2
(121 sentences)

Sequence

272355 reads, 174.0 reads per million, 234 experiments

cggcccucgcggggGUGCAUUGUAGUUGCAUUGCAUGugucagacugggagugCAAUGCCCCUGCCAUGCAGCCcggcggggguccc
.(((((((((.(((.(((((.((((..(((((((((...(((...)))..)))))))))..)))).))))).))).)))))))))..

Structure

-c         g   G     U    UU         Gug   g 
  ggcccucgc ggg UGCAU GUAG  GCAUUGCAU   uca  
  ||||||||| ||| ||||| ||||  |||||||||   ||| a
  cugggggcg cCC ACGUA CGUC  CGUAACgug   ggu  
cc         g   G     C    CC         -ag   c 

Annotation confidence High

Genome context

chr14: 4937943-4938029 [-]

Mature gga-miR-33-5p

• Accession: MIMAT0001100
• Description: Gallus gallus gga-miR-33-5p mature miRNA
• Sequence: 15 - GUGCAUUGUAGUUGCAUUGCAUG - 37
• Evidence: experimental ; cloned [1-2], Illumina [3]

Mature gga-miR-33-2-3p

• Accession: MIMAT0051309
• Description: Gallus gallus gga-miR-33-2-3p mature miRNA
• Sequence: 54 - CAAUGCCCCUGCCAUGCAGCC - 74
• Evidence: experimental ; cloned [1-2], Illumina [3]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196