Stem-loop bhv5-mir-B8

Accession

MI0029329

Description

Bovine herpesvirus 5 bhv5-mir-B8 precursor miRNA

Gene family

MIPF0002021; mir-B8

Sequence

cgcgcccccuCGCGGCGAAAAAAUCUAAUGGcggauaaucgagagcuauuguauuuuugcgccagcgggggggccgg
((.((((((((((((((.((((((.(((((((............))))))).)))))).)))).)))))))))))).

Structure

-  c          -    A      C       ggaua 
 cg gcccccuCGC GGCG AAAAAU UAAUGGc     a
 || |||||||||| |||| |||||| |||||||      
 gc cgggggggcg ccgc uuuuua guuaucg     u
g  -          a    g      u       agagc 

Annotation confidence Not enough data

Comments

This sequence was named bhv5-miR-B10 in [1], but is related to bhv1-miR-B8, not bhv1-miR-B10.

Genome context

Unknown

Mature bhv5-miR-B8

• Accession: MIMAT0035712
• Description: Bovine herpesvirus 5 bhv5-miR-B8 mature miRNA
• Sequence: 11 - CGCGGCGAAAAAAUCUAAUGG - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24385436
   Bovine herpesvirus 5 encodes a unique pattern of microRNAs compared with bovine herpesvirus 1
   "Tang Q, Wu YQ, Chen DS, Zhou Q, Chen HC, Liu ZF"
   "J Gen Virol (2014) 95:671-678