Stem-loop bhv5-mir-B13

Accession

MI0029327

Description

Bovine herpesvirus 5 bhv5-mir-B13 precursor miRNA

Sequence

cgccgcgcgacgggccgccgccgcuggagggcccgcugcugacgcccUCCGGCGAGGCCUGGCCCGGCAGCgcgccgccgc
((.(((((..(((((((((..(((((((((((...........))))))))))).)))..))))))...))))).))....

Structure

----  c     -ga      --   gc           ccgc 
    cg cgcgc   cgggcc  gcc  cgcuggagggc    u
    || |||||   ||||||  |||  |||||||||||    g
    gc gcgCG   GCCCGG  CGG  GCGGCCUcccg    c
cgcc  c     ACG      UC   -A           cagu 

Annotation confidence Low

Comments

This sequence was named bhv5-miR-B7 in [1], but is unrelated to bhv1-miR-B7.

Genome context

Unknown

Mature bhv5-miR-B13

• Accession: MIMAT0035710
• Description: Bovine herpesvirus 5 bhv5-miR-B13 mature miRNA
• Sequence: 48 - UCCGGCGAGGCCUGGCCCGGCAGC - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24385436
   Bovine herpesvirus 5 encodes a unique pattern of microRNAs compared with bovine herpesvirus 1
   "Tang Q, Wu YQ, Chen DS, Zhou Q, Chen HC, Liu ZF"
   "J Gen Virol (2014) 95:671-678