Stem-loop bhv5-mir-B12

Accession

MI0029326

Description

Bovine herpesvirus 5 bhv5-mir-B12 precursor miRNA

Sequence

ugccggcgccCAGGCCGGCGGGGCUCCCGUcgccggcggcggcacgcgcuccgggacgccgccgcgccgcgccugcac
(((.(((((...(((((((((.(.(((((..((((((....)).)).))..)))))).)))))).)))))))).))).

Structure

-   c     cCA   -      G C     Uc  -  -  g 
 ugc ggcgc   GGC CGGCGG G UCCCG  gc cg gc g
 ||| |||||   ||| |||||| | |||||  || || ||  
 acg ccgcg   ccg gccgcc c agggc  cg gc cg c
c   u     ---   c      g -     cu  c  a  g 

Annotation confidence Not enough data

Comments

This sequence was named bhv5-miR-B6 in [1], but is unrelated to bhv1-miR-B6.

Genome context

Unknown

Mature bhv5-miR-B12

• Accession: MIMAT0035709
• Description: Bovine herpesvirus 5 bhv5-miR-B12 mature miRNA
• Sequence: 11 - CAGGCCGGCGGGGCUCCCGU - 30
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24385436
   Bovine herpesvirus 5 encodes a unique pattern of microRNAs compared with bovine herpesvirus 1
   "Tang Q, Wu YQ, Chen DS, Zhou Q, Chen HC, Liu ZF"
   "J Gen Virol (2014) 95:671-678