Stem-loop bma-mir-2h-1

Accession

MI0029226

Description

Brugia malayi bma-mir-2h-1 precursor miRNA

Literature search

3 open access papers mention bma-mir-2h-1
(33 sentences)

Sequence

uucccgaaaauacuaauggagcAGUCGUAUCGACUCUGAUAUguugucacauuguuucucaUAUCGCAGAUUCGAUUCGACAAgcugcacuuguagauaccggggauaaugccacuca
((((((....(((...((.(((.((((.(((((.(((((((((................))))))..))).))))).))))..))).))...))).....))))))............

Structure

------------      -aaaa   uaa  g   -A    U     C   --      uugucac 
            uucccg     uac   ug agc  GUCG AUCGA UCU  GAUAUg       a
            ||||||     |||   || |||  |||| ||||| |||  ||||||        
            aggggc     aug   ac ucg  CAGC UAGCU AGA  CUAUac       u
acucaccguaau      cauag   uuc  g   AA    U     U   CG      ucuuugu 

Annotation confidence Not enough data

Genome context

Bmal_v3_scaffold153: 18589-18706 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from bma-mir-2h-1

Mature bma-miR-2h-5p

• Accession: MIMAT0037529
• Description: Brugia malayi bma-miR-2h-5p mature miRNA
• Sequence: 23 - AGUCGUAUCGACUCUGAUAU - 42
• Evidence: experimental ; Illumina [1]

Mature bma-miR-2h-3p

• Accession: MIMAT0037530
• Description: Brugia malayi bma-miR-2h-3p mature miRNA
• Sequence: 62 - UAUCGCAGAUUCGAUUCGACAA - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24824352
   Diversity and expression of microRNAs in the filarial parasite, Brugia malayi
   Poole CB, Gu W, Kumar S, Jin J, Davis PJ, Bauche D, McReynolds LA
   PLoS One (2014) 9:e96498