Stem-loop bma-mir-9529

Accession

MI0029220

Description

Brugia malayi bma-mir-9529 precursor miRNA

Sequence

261 reads, 21.0 reads per million, 14 experiments

accuguuugccuuguuuuccugucgGUACGUACCUAGCUUCUAGAAUuuuuuacuaauUCUGGAAGCUGAGUACGUAUCUgcaggaagucuauuuacguuuuug
...............((((((((.(((((((((.((((((((((((((.......)))))))))))))).))))))))).))))))))................

Structure

-accuguuugccuugu        c         C              uu 
                uuuccugu gGUACGUAC UAGCUUCUAGAAUu  u
                |||||||| ||||||||| ||||||||||||||  u
                gaaggacg CUAUGCAUG GUCGAAGGUCUuaa  a
guuuuugcauuuaucu        U         A              uc 

Annotation confidence Medium

Genome context

Bmal_v3_scaffold1: 1213357-1213460 [+]

Mature bma-miR-9529-5p

• Accession: MIMAT0057257
• Description: Brugia malayi bma-miR-9529-5p mature miRNA
• Sequence: 26 - GUACGUACCUAGCUUCUAGAAU - 47
• Evidence: experimental ; Illumina [1]

Mature bma-miR-9529-3p

• Accession: MIMAT0037523
• Description: Brugia malayi bma-miR-9529-3p mature miRNA
• Sequence: 59 - UCUGGAAGCUGAGUACGUAUCU - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24824352
   Diversity and expression of microRNAs in the filarial parasite, Brugia malayi
   Poole CB, Gu W, Kumar S, Jin J, Davis PJ, Bauche D, McReynolds LA
   PLoS One (2014) 9:e96498